gallantlab/pycortex

Pycortex is a python-based toolkit for surface visualization of fMRI data

What it solves

Pycortex provides a way to visualize volumetric neuroimaging data, such as fMRI, on cortical surfaces, making it easier to analyze and interpret brain activity patterns.

How it works

The library maps 3D volumetric data onto a 2D cortical surface representation, allowing users to interactively visualize brain activity. It integrates with IPython for interactive exploration and supports headless rendering for automated processing.

Who it’s for

Neuroscientists and researchers studying brain activity using fMRI or other volumetric neuroimaging techniques.

Highlights

  • Interactive surface visualization of fMRI data.
  • Support for volumetric neuroimaging data.
  • Headless rendering capabilities.
  • Integration with IPython for interactive analysis.

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